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Published Article

  1. Ali, M. A.; Sheikh, H.; Yaseen, M.; Faruqe, M. O.; Ullah, I.; Kumar, N.; Bhat, M. A.; Mollah, M. N. H. Exploring the Therapeutic Potential of Petiveria Alliacea L. Phytochemicals: A Computational Study on Inhibiting SARS-CoV-2’s Main Protease (Mpro). Molecules 2024, 29 (11). https://doi.org/10.3390/molecules29112524.

  2. Ali, M.A.; Reza, M. S.; Ahsan, M. A.; Sheikh, H.; Kibria, M. K.; Mollah, M. N. H. Detection of top-ranked phytocompounds from the black-cumin medicinal plant as the potential inhibitors against SARS-CoV-2 infections by molecular docking, ADME/T and DFT analyses. Submitted to Heliyon, Status: Accepted for Publication.

  3. Kibria, M. K.; Ali, M. A.; Yaseen, M.; Khan, I. A.; Bhat, M. A.; Islam, M. A.; Mahumud, R. A.; Mollah, M. N. H. Discovery of Bacterial Key Genes from 16S RRNA-Seq Profiles That Are Associated with the Complications of SARS-CoV-2 Infections and Provide Therapeutic Indications. Pharmaceuticals 2024, 17 (4). https://doi.org/10.3390/ph17040432.

  4. Kibria, M. K.; Ali, M. A.; Mollah, M. N. H. “Exploring Bacterial Key Genes and Therapeutic Agents for Breast Cancer among the Ghanaian Female Population: Insights from In Silico Analyses” PLoS ONE 19(11), https://doi.org/10.1371/journal.pone.0312493.

  5. Alamin, M. H.; Rahaman, M. M.; Ferdousi, F.; Sarker, A.; Ali, M. A.; Hossen, M. B.; Sarker, B.; Kumar, N.; Mollah, M. N. H. In-Silico Discovery of Common Molecular Signatures for Which SARS-CoV-2 Infections and Lung Diseases Stimulate Each Other, and Drug Repurposing. PLoS One 2024, 19 (7). https://doi.org/10.1371/journal.pone.0304425.

  6. Ahmmed, R.; Hossen, M. B.; Ajadee, A.; Mahmud, S.; Ali, M. A.; Mollah, M. M. H.; Reza, M. S.; Islam, M. A.; Mollah, M. N. H. Bioinformatics Analysis to Disclose Shared Molecular Mechanisms between Type-2 Diabetes and Clear-Cell Renal-Cell Carcinoma, and Therapeutic Indications. Rep. 2024, 14 (1). https://doi.org/10.1038/s41598-024-69302-w.

  7. Ajadee, A.; Mahmud, S.; Hossain, M. B.; Ahmmed, R.; Ali, M. A.; Reza, M. S.; Sarker, S. K.; Mollah, M. N. H. Screening of Differential Gene Expression Patterns through Survival Analysis for Diagnosis, Prognosis and Therapies of Clear Cell Renal Cell Carcinoma. PLoS One 2024, 19 (9). https://doi.org/10.1371/journal.pone.0310843.

  8. Mahmud, S.; Ajadee, A.; Hossen, M. B.; Islam, M. S.; Ahmmed, R.; Ali, M. A.; Mollah, M. M. H.; Reza, M. S.; Mollah, M. N. H. Gene-Expression Profile Analysis to Disclose Diagnostics and Therapeutics Biomarkers for Thyroid Carcinoma. Biol. Chem. 2024, 108245. https://doi.org/https://doi.org/10.1016/j.compbiolchem.2024.108245.

  9. Hossen, M. B.; Islam, M. A.; Horaira, M. A.; Ali, M. A.; Himu, U. H.; Kibria, M. K.; Reza, M. S.; Sarker, A.; Hossen, M. A.; Kabir, M. H.; Mollah, M. N. H. Robust Identification of Shared Key Genomic Biomarkers for Diagnosis and Therapies of Pancreatic Cancer with Type-2 Diabetes. Research Square (Preprint) 2023. https://doi.org/10.21203/rs.3.rs-3246376/v1.

Some Selected Conferences

1. Md Ahad Ali, Md. Shahidul Islam, Hasan Ahmad, and Md Mahbubor Rahman* “Functionalization of Iron Oxide Nanoparticles with pH Cleavable Moiety Containing Polyglycerol for Drug Delivery” Chem PS-34; 1st National Conferences on Advance in Science and Technology, Faculty of Science, Bangladesh University of Engineering & Technology, Dhaka 1000, Bangladesh (7-8 December, 2023)

2. Md. Sohel Rana, Md. Ahad Ali, C.M. Zakaria, Md. Kudrat – E-Zahan and Md. Ali Asraf “Synthesis, spectral characterization, biological activity evaluation, molecular docking, DFT, ADMET and pass prediction of 2-aminophenol-based Schiff base metal complexes of Cu(II), Ni(II) and Co(II).” Chem PS-22; 1st National Conferences on Advance in Science and Technology, Faculty of Science, Bangladesh University of Engineering & Technology, Dhaka 1000, Bangladesh (7-8 December, 2023)

3. Md. Ahad Ali, Md. Shahidul Islam, Hasan Ahmad, and Md Mahbubor Rahman, ‘Covalent Conjugation of Hydrazine to Polyglycerol Functionalized Iron Oxide Nanoparticles for pH- triggered Drug Delivery’ OP: ID206, International conference on the role of science and technology towards 4IR, Faculty of Science, University of Rajshahi, Bangladesh. (October 5 – October 6, 2023).

4. Humaira Sheikh, Md. Ahad Ali, Md Omar Faruqe, Md. Nurul Haque Mollah, ‘Investigation of the Structural and Dynamic Properties of Petiveria alliacea L. Phytochemicals as SARS-CoV-2 Mpro Inhibitors.’ PP: ID166, International conference on the role of science and technology towards 4IR, Faculty of Science, University of Rajshahi, Bangladesh. (October 5 – October 6, 2023).

5. Md. Sohel Rana, Md. Ahad Ali, C.M. Zakaria, Dr. Md. Kudrat – E – Zahan and Md. Ali Asraf “Synthesis, spectral characterization, biological activity evaluation, molecular docking, DFT, ADMET and pass prediction of 2-aminophenol-based Schiff base metal complexes of Cu(II), Ni(II) and Co(II).”  PP: ID227, International conference on the role of science and technology towards 4IR, Faculty of Science, University of Rajshahi, Bangladesh. (October 5 – October 6, 2023).

6. M. A. Ali, M. S. Reza, H. Sheikh, M. M. Rahman, M. N. H. Mollah, ‘A Computational Investigation of Nigella Sativa Components to Identify Potential Natural Antiviral for Covid-19 Therapeutics: Molecular Docking, Simulation and, DFT Calculation’ OP;11. J. Bangladesh Acad. Sci (2022); 46 (Suppl 1): 29; 5th Young Scientist Congress, Organized by Bangladesh Academy of Sciences. Agargaon, Dhaka 1207, Bangladesh.  (November 25 – 27, 2022).

7. Md. Ahad Ali, Md. Selim Reza, Humaira Sheikh, Md. Mahbubor Rahman, Md. Nurul Haque Mollah, ‘Investigating the Structural Stability of Novel Plant’s Seed Derived Molecules of Black Cumin as Inhibitors of SARS-COV2’. Chem-PS-25; 1st International Conference on Frontier in Sciences (ICFS-2022 Organized by Bangladesh University of Engineering & Technology, Dhaka 1000, Bangladesh. 

8. Md. Ahad Ali, Asmaulhusna Biswas, Humaira Sheikh, Md. Nurul Haque Mollah “In-silico screening of natural Phytocompounds from S. Cumini as an anti-Breast Cancer agent based on Molecular docking, Simulation, ADMET and DFT calculation” 1st International Conference on Public Health -(ICPH) 2023, (August 3-August5, 2023)